BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A05LP1|AL426936
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1595 1619 0.0
>3x_Contig1595
Length = 10795
Score = 1619 bits (808), Expect = 0.0
Identities = 849/871 (97%), Gaps = 1/871 (0%)
Strand = Plus / Plus
Query: 1 gtttagatcacntgctgaaacggtatgaatctttactaggacaatgtaaagagaataagg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 gtttagatcacttgctgaaacggtatgaatctttactaggacaatgtaaagagaataagg 1432
Query: 61 ggagggatgcaagcctgatcaaggaattgaaacaatggaaaacgttgaaatnagagattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1433 ggagggatgcaagcctgatcaaggaattgaaacaatggaaaacgttgaaattagagattc 1492
Query: 121 aagaccaatcagtggtatatgacaaggataaagatgaccatcattgccctgttgctggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 aagaccaatcagtggtatatgacaaggataaagatgaccatcattgccctgttgctggag 1552
Query: 181 gaatactgcaattyccaagtcgaaccgttatgtttaaatttyygagatggcttaaagacg 240
||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1553 gaatactgcaatttccaagtcgaaccgttatgtttaaatttttgagatggcttaaagacg 1612
Query: 241 atatcaagtattccaaacggttcatcccgatctcaaagcttcccaatgagtacttctccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 atatcaagtattccaaacggttcatcccgatctcaaagcttcccaatgagtacttctccg 1672
Query: 301 gcaaacaattgaytgaatccattaggaaacagtatcctgatagcgttgtttctttgtacc 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 gcaaacaattgattgaatccattaggaaacagtatcctgatagcgttgtttctttgtacc 1732
Query: 361 aacaagaaaaanygggccaatggttcatgagtgaaggttacatggctcattataacgabc 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1733 aacaagaaaaattgggccaatggttcatgagtgaaggttacatggctcattataacgatc 1792
Query: 421 tcctcggggtgaggaaagcgttcagttgtaacggctactactgctggaaagamctggatc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1793 tcctcggggtgaggaaagcgttcagttgtaacggctactactgctggaaagaactggatc 1852
Query: 481 agcagaaatctgtcaagtacaacctggcaacggtgaacggattaactcgggaacaatgga 540
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1853 agcagaaatctgtcaagtacaacctggcaacggtgaacggattaatttgggaacaatgga 1912
Query: 541 gtaaatatacgacgcaaaagtcacagtttgamacgaaccatttcaatcagatggatcaat 600
|||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 1913 gtaaatatacgatgcaaaagttacagtttgaaacgaaccatttcaatcagatggatcaat 1972
Query: 601 tagcacagctgagagaagagctagtgcaaacaatgaagcatttcaacggtacactggagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 tagcacagctgagagaagagctagtgcaaacaatgaagcatttcaacggtacactggagg 2032
Query: 661 atacatggcacattacaagcaaggaaagtgtaaaacccakcagtgtaacgcgtacaatcc 720
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 2033 atacatggcacattacaagcaaggaaagtgtaaaacccagcagtgtaacg-gtacaatcc 2091
Query: 721 atgtatgagcagaacatgggcagtattggttttsmcgtgacatcgaacgaacctataatc 780
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2092 atgtatgagcagaacatgggcagtattggtttttacgtgacatcgaacgaacctataatc 2151
Query: 781 aagtacaatagtgagacaacaaagtttgavwtgactagtccaatacctgatgatattwca 840
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 2152 aagtacaatagtgagacaacaaagtttgaaatgactagtccaatacctgatgatattaca 2211
Query: 841 ggcaactcccttctacacaggctaatagatg 871
|||||||||||||||||||||||||||||||
Sbjct: 2212 ggcaactcccttctacacaggctaatagatg 2242
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4626
Number of Sequences: 1807
Number of extensions: 4626
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)